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GForge - Comprehensive, Elegant, Scalable Teamwork https://www.nitrc.org/pro/ |
NITRC: Welcome https://www.nitrc.org/ |
INIA19 Primate Brain Atlas: Tool/Resource Info https://nitrc.org/projects/inia19/ |
The Federated Tumor Segmentation (FeTS) initiative | CBICA https://fets.projects.nitrc.org/ |
Cancer Imaging Phenomics Toolkit (CaPTk): Overview https://captk.projects.nitrc.org/ |
NITRC: Snippet Library https://www.nitrc.org/snippet/ |
International Neuroimaging Data-sharing Initiative http://fcon_1000.projects.nitrc.org/ |
XNAT Documentation Home https://www.nitrc.org/frs/downloadlink.php/4056 |
Download 3D Slicer | 3D Slicer https://www.nitrc.org/frs/downloadlink.php/77 |
NiiStat is a set of Matlab scripts for analyzing neuroimaging ... https://www.nitrc.org/frs/downloadlink.php/10834 |
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1.9 and www/themes/nitrc3.0/scripts/ugly.jsTools & Resources Browse By Attribute Browse By Top Downloads Compare Tools/Resources Download Code Snippets Image Repository Register New Tool or Resource Suggest a Tool or Resource Suggest a Data Set Community Home Community Forums Recently Active Forums Events News Funding Career Opportunities Documents Wiki Support Contact Us Feedback User Guide Technical Information View Bug/Feature/Support Requests Submit NITRC Bug Submit NITRC Feature Request Submit NITRC Support Request About NITRCNITRC TEAM Our Partners Our Web Trends Our Testimonials Cite NITRC Member login | Register | Help search Related Web Pages Related Web Pages Matrix View Tools/Resources People NIF for Advanced Search Support NITRC. Donate Today! New to NITRC? Learn more here. Featured tool/resource CONN : functional connectivity toolbox CONN is a Matlab-based cross-platform software for the computation, display, and analysis of functional connectivity in fMRI (fcMRI). CONN includes a rich set of connectivity analyses (seed-based correlations, ROI-to-ROI graph analyses, ICA, masked ICA, fc-MVPA, generalized PPI, ALFF, ICC, GCOR, LCOR, etc.) in a simple-to-use and powerful software package CONN is available for resting state data (rsfMRI) as well as task-related designs. It covers the entire pipeline from raw fMRI data to hypothesis testing. Highlights: Comprehensive quality assurance methods/measures/displays (scrubbing/ART, CompCor/ICA/GSR denoising, GCOR/FD QC covariates) Connectome-wide analyses (ICA, fc-MVPA) Dynamic connectivity analyses (dyn-ICA) FWE-control of connectivity matrices (NBS) Non-parametric cluster-level statistics (permutation tests) ANOVA, regression, longitudinal, and mixed designs Parallelization options (SGE/Grid Engine, PBS/Torque, LSF, Slurm) Mac/Windows/Linux/HPC SPM8/SPM12 https://www.conn-toolbox.org Featured tool/resource eeg_pipelines This repository contains 4 stand-alone pipelines (along with one test dataset), in EEGLAB, Fieldtrip, Brainstorm, and MNE. There is also a link to the HAPPE EEGLAB-based pipeline. The pipelines have been optimized to process event-related potential and are described in the associated manuscript. All pipelines run on the sample data provided although they do require a separate installation of the corresponding software packages. Based on our scanning of the hyperparameter space for artifact rejection and preprocessing, these are the best automated EEG pipelines for EEGLAB, Fieldtrip, Brainstorm, and MNE to process ERP. Test them yourself by plugging in your data. Featured tool/resource OASIS-4: Clinical Cohort OASIS-3 and OASIS-4 are the latest releases in the Open Access Series of Imaging Studies (OASIS) that is aimed at making neuroimaging datasets freely available to the scientific community. By compiling and freely distributing this multimodal dataset generated by the Knight ADRC and its affiliated studies, we hope to facilitate future discoveries in basic and clinical neuroscience. OASIS-4 contains MR, clinical, cognitive, and biomarker data for 663 individuals aged 21 to 94 that presented with memory complaints. This is a unique dataset and not an update to the OASIS-3 Longitudinal Multimodal Neuroimaging dataset. https://sites.wustl.edu/oasisbrains/home... 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